igraph Questions

3

Solved

I have this graph network in R: library(igraph) n_rows <- 10 n_cols <- 5 g <- make_lattice(dimvector = c(n_cols, n_rows)) layout <- layout_on_grid(g, width = n_cols) n_nodes <- vco...
Kovar asked 13/9, 2024 at 12:49

1

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This is a follow-up question from my previous question Assign Random Colors in R (After much trial and error) I wrote this function which randomly colors some nodes on a network and colors 3 of the...
Emanuelemanuela asked 4/9, 2024 at 15:18

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I have been stuck with computing efficiently the number of classmates for each student from a course-level database. Consider this data.frame, where each row represents a course that a student has ...
Lockyer asked 9/7, 2024 at 16:49

3

I am trying to learn few basic functions in Igraph- But, I am having problems computing the degrees from a gragph: see example below (I copied the following example from this site): Example of dat...
Klansman asked 12/9, 2014 at 16:1

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My question follows the one here, about how to change the vertex frame width in igraph. With updates in igraph, the proposed solution seems not to work anymore. Does anybody have a solution (or m...
Mahayana asked 28/8, 2013 at 9:14

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When plotting a graph using igraph package, how to rotate the vertex label in the plot, for example, by pi/4? library(igraph) g = graph.ring(5) V(g)$name = paste(LETTERS[1:5], 'rotate_45') plot.ig...
Noellenoellyn asked 12/2, 2015 at 18:13

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Background Assuming we have a family of matrices Ms of size n-by-n, which should meet the following requirements: Entries of the matrix are either 0 or 1, i.e., boolean, but diagonal entries are a...
Skimmia asked 13/8, 2023 at 22:37

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I am using Igraph package in R and when I am accessing the list of vertices names through V(graph), I am getting the following result: Vertex sequence: [1] "d66cp96igcdnt25brjeics9d11" "bovlonq25...
Looming asked 12/4, 2013 at 17:10

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I have a large dataset with sites that were sampled irregularly over 40 years. I want to select the maximum number of sites that share, let’s say, at least 5 years of data. Any pointers would be ap...
Hainaut asked 21/7, 2023 at 12:55

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I have the following network: g <- graph(c("Amy", "Ram", "Ram", "Li", "Li", "Amy", "Amy", "Li", "Kate", "Li"), directed=TRUE) and would like to understand how Closeness centrality in this...
Chibouk asked 10/7, 2018 at 16:39

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Not a question but a contribution. Having used igraph for a few years, I have not yet come across a summary table indicating which community-detection algorithm is best for which network configurat...
Novelty asked 27/5, 2023 at 0:43

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My general problem is that I loose the vertex names / labels (not sure about the right word here) when generating a graph using iGraph. I have an edge list IC_edge_sub of a bipartite network, tha...
Obstetrician asked 8/6, 2012 at 4:45

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I am using igraph for plotting a graph in R doing something like plot(mygraph, vertex.color = "green"). Is there a way to change the color and/or width of the vertices' borders?
Nalor asked 18/3, 2012 at 15:22

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I wanted to visualize a network with the data I have and would like to graph them with specific edge lengths. I use Python, and I've tried networkx and igraph to plot but all seem to assign fixed e...
Jaquelynjaquenetta asked 5/12, 2009 at 6:6

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I have changed my computer to a Linux Mint x64 OS and I have throubles with a python library, igraph library, when i try to execute and old program I made. DeprecationWarning: To avoid name col...
Exhilaration asked 24/3, 2016 at 12:53

4

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I have the following tibble, contact <- tribble( ~name, ~phone, ~email, 'John', 123, '[email protected]', 'John', 456, '[email protected]', 'John', 456, '[email protecte...
Archaeological asked 17/2, 2023 at 17:31

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In R, I have a weighted undirected graph as an igraph object : IGRAPH e7a8fac UNW- 306 2829 -- + attr: name (v/c), label (v/c), nom (v/c), sigle (v/c), statut (v/c), champ (v/c), cp (v/c), info (...
Mountain asked 9/4, 2018 at 8:51

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Recently I've been working with python-igraph package and all my code is based on graphs I create using igraph. Right now, I need to calculate some measures for my graph which apparently are implem...
Gratulate asked 21/4, 2015 at 21:52

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I am using qgraph in R. It automatically shortens node labels, which can be very useful. But how do I ask it to use full labels? Here is an example. require(qgraph) m <- matrix(1,3,3) colnames...
Snashall asked 21/7, 2016 at 20:58

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I am working with the R programming language. Suppose there are 100 people - each person is denoted with an ID from 1:100. Each person can be friends with other people. The dataset can be represent...
Sylvanus asked 29/12, 2022 at 2:59

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I am trying to draw a network visualization to resemble a flow diagram. I'm fairly close with the following code, but I have a couple questions: Is this the best layout() algorithm, or can I manu...
Sitra asked 19/3, 2011 at 19:11

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I simulated some data and created a graph network in R using visnetwork: library(igraph) library(dplyr) library(visNetwork) #create file from which to sample from x5 <- sample(1:100, 1100, repl...
Pelion asked 3/11, 2020 at 1:38

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I started evaluating igraph library and its functionality. I need to calculate hamiltonian path of a graph generated by igraph_de_bruijn() function. Is there any ready made function in igraph libra...
Gusto asked 24/10, 2014 at 23:6

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I am working with the R programming language. I generated the following random data set in R and made a plot of these points: library(ggplot2) set.seed(123) x_cor = rnorm(5,100,100) y_cor =...
Scammony asked 15/3, 2022 at 16:40

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I made the following 25 network graphs (all of these graphs are copies for simplicity - in reality, they will all be different): library(tidyverse) library(igraph) set.seed(123) n=15 data = data....
Homothermal asked 23/2, 2022 at 22:42

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