I am trying to work on a clustering problem for which I need to plot a scatter plot for my clusters. %matplotlib inline import matplotlib.pyplot as plt df = pd.merge(dataframe,actual_cluster) plt....

I am using this GSDMM python implementation to cluster a dataset of text messages. GSDMM converges fast (around 5 iterations) according the inital paper. I also have a convergence to a certain numb...

I'm clustering a sample of about 100 records (unlabelled) and trying to use grid_search to evaluate the clustering algorithm with various hyperparameters. I'm scoring using silhouette_score which w...

I've been searching for an answer for this question for quite a while, so I'm hoping someone can help me. I'm using dbscan from the fpc library in R. For example, I am looking at the USArrests data...

I am confusing about the difference between "sklearn.cluster.k_means" and "sklearn.cluster.KMeans" when I should use one of them?

I am a student of clustering and R. In order to obtain a better grip of both I would like to compute the distance between centroids and my xy-matrix for each iteration till it "converges". How can ...

I have a database of images that contains identity cards, bills and passports. I want to classify these images into different groups (i.e identity cards, bills and passports). As I read about that,...

I want to know whether the k-means clustering algorithm can do classification? If I have done a simple k-means clustering . Assume I have many data , I use k-means clusterings, then get 2 cluster...

I'm trying to draw a complete-link scipy.cluster.hierarchy.dendrogram, and I found that scipy.cluster.hierarchy.linkage is slower than sklearn.AgglomerativeClustering. However, sklearn.Agglomerati...

I am learning python scikit. The example given here displays the top occurring words in each Cluster and not Cluster name. http://scikit-learn.org/stable/auto_examples/document_clustering.html I...

I am unclear about why k-means clustering can have overlap in clusters. From Chen (2018) I saw the following definition: "..let the observations be a sample set to be partitioned into K disjoint c...

I am unable to manage the RSS feeds easily due to an overwhelming number of new stories / similar news contents posted in various news sites. For subjects such as world news and business news, many...

Data I have the following (simplified) dataset, we call df from now on: species rank value 1 Pseudomonas putida family Pseudomonadaceae 2 Pseudomonas aeruginosa family Pseudomonadaceae 3 Enterob...

This code is what I am using for silhouette_score. And in here I am using Agglomerative Clustering, linkage as Ward. I would like to get "Centroid" of Agglomerative Clustering, would it be possibl...

I'm doing some tests clustering a big number of very large sparse vectors representing term-frequency-inverse-document-frequency of various hypertextual documents. What algorithm would you suggest ...

I am using Scipy for hierarchial clustering. I do manage to get flat clusters on a threshold using fcluster. But I need to visualize the dendrogram formed. When I use the dendrogram method, it work...

Today i'm trying to learn something about K-means. I Have understand the algorithm and i know how it works. Now i'm looking for the right k... I found the elbow criterion as a method to detect the ...

You can easily extract the silhouette score with 1 line of code that averages the scores for all your clusters but how do you extract each of the intermediate scores from the scikit learn implement...

How do I plot (in python) the distance graph for a given value of min-points in DBSCAN??? I am looking for the knee and corresponding epsilon value. In the sklearn I do not see any method that r...

I am working on a python project where I study RNA structure evolution (represented as a string for example: "(((...)))" where the parenthesis represent basepairs). The point being is that I have a...

I trained a KMEANS clustering model using Google Bigquery, and it gives me these metrics in the evaluation tab of my model. My question is are we trying to maximize or minimize Davies-Bould...

Hopefully this can be done with python! I used two clustering programs on the same data and now have a cluster file from both. I reformatted the files so that they look like this: Cluster 0: Bruce...

What is meant by "random-state" in python KMeans function? I tried to find out from Google and referred https://scikit-learn.org/stable/modules/generated/sklearn.cluster.KMeans.html but I could not...

I need to perform clustering without knowing in advance the number of clusters. The number of cluster may be from 1 to 5, since I may find cases where all the samples belong to the same instance, o...

My task is to perform clustering on a data set. The variables have been scaled and centered. I am using the following code to find the optimal number of clusters: d <- dist(df, method = "eu...