I recommend BCEL 6. You can also use ASM, but I hear BCEL is easier to use. Here is a quick test method for making a field final:
public static void main(String[] args) throws Exception {
System.out.println(F.class.getField("a").getModifiers());
JavaClass aClass = Repository.lookupClass(F.class);
ClassGen aGen = new ClassGen(aClass);
for (Field field : aGen.getFields()) {
if (field.getName().equals("a")) {
int mods = field.getModifiers();
field.setModifiers(mods | Modifier.FINAL);
}
}
final byte[] classBytes = aGen.getJavaClass().getBytes();
ClassLoader cl = new ClassLoader(null) {
@Override
protected synchronized Class<?> findClass(String name) throws ClassNotFoundException {
return defineClass("F", classBytes, 0, classBytes.length);
}
};
Class<?> fWithoutDeprecated = cl.loadClass("F");
System.out.println(fWithoutDeprecated.getField("a").getModifiers());
}
Of course, you would actually write your classes out to disk as files and then jar them up but this is easier for trying things out. I don't have BCEL 6 handy, so I can't modify this example to remove annotations, but I imagine the code would be something like:
public static void main(String[] args) throws Exception {
...
ClassGen aGen = new ClassGen(aClass);
aGen.setAttributes(cleanupAttributes(aGen.getAttributes()));
aGen.getFields();
for (Field field : aGen.getFields()) {
field.setAttributes(cleanupAttributes(field.getAttributes()));
}
for (Method method : aGen.getMethods()) {
method.setAttributes(cleanupAttributes(method.getAttributes()));
}
...
}
private Attribute[] cleanupAttributes(Attribute[] attributes) {
for (Attribute attribute : attributes) {
if (attribute instanceof Annotations) {
Annotations annotations = (Annotations) attribute;
if (annotations.isRuntimeVisible()) {
AnnotationEntry[] entries = annotations.getAnnotationEntries();
List<AnnotationEntry> newEntries = new ArrayList<AnnotationEntry>();
for (AnnotationEntry entry : entries) {
if (!entry.getAnnotationType().startsWith("javax")) {
newEntries.add(entry);
}
}
annotations.setAnnotationTable(newEntries);
}
}
}
return attributes;
}