If using GitHub on Windows:
- Make changes locally.
- Open GitHub, switch to local repositories, double click repository.
- Switch the branch(near top of window) to the branch that you created the pull request from(i.e. the branch on your fork side of the compare)
- Should see option to enter commit comment on right and commit changes to your local repo.
- Click sync on top, which among other things, pushes your commit from local to your remote fork on GitHub.
- The pull request will be updated automatically with the additional commits. This is because the pulled request represents a diff with your fork's branch. If you go to the pull request page(the one where you and others can comment on your pull request) then the Commits tab should have your additional commit(s).
This is why, before you start making changes of your own, that you should create a branch for each set of changes you plan to put into a pull request. That way, once you make the pull request, you can then make another branch and continue work on some other task/feature/bugfix without affecting the previous pull request.