Open the Package Explorer, look at your scala source. Does the icon displays a S
(for Scala), or a J
(for Java)?
If you see a S
, then you are likely missing the Scala Nature. As Luigi suggested, try to add the Scala Nature and see if that fixes your issue (Right-click on project, Configure > Add Scala Nature.)
Otherwise, if you see a J
, the odds are that "JDT Weaving" is not enabled. That should not happen and might depend on other plugins you have installed.
What I would try if I were you is simply uninstalling all Scala IDE plugins from Eclipse ("Scala IDE for Eclipse", and also the "JDT Weaving for Scala" if you see it in the list of installed plugins). Then, reinstall Scala IDE 2.0.0-RC04. I know, it's not the ideal solution, but it's hard to tell what is going on without more information.
If that doesn't work either, please write a message in the scala-ide-user Mailing List. Make sure to provide the full list of plugins you have in your Eclipse installation. That might help us understand what is going on.