How can I improve perfomace of Hilbert scan of image?
Asked Answered
O

1

5

This method of image scanning based on Hilbert Curve. Curve looks like (from 1 to 6 order): enter image description here

It can be used for image scan. So, for example, my code for 3-order curve is:

Hilbert=[C(1,1) C(1,2) C(2,2) C(2,1) C(3,1) C(4,1) C(4,2) C(3,2) C(3,3) C(4,3) C(4,4) C(3,4)...
      C(2,4) C(2,3) C(1,3) C(1,4) C(1,5) C(2,5) C(2,6) C(1,6) C(1,7) C(1,8) C(2,8) C(2,7)...
      C(3,7) C(3,8) C(4,8) C(4,7) C(4,6) C(3,6) C(3,5) C(4,5) C(5,5) C(6,5) C(6,6) C(5,6)...
      C(5,7) C(5,8) C(6,8) C(6,7) C(7,7) C(7,8) C(8,8) C(8,7) C(8,6) C(7,6) C(7,5) C(8,5)...
      C(8,4) C(8,3) C(7,3) C(7,4) C(6,4) C(5,4) C(5,3) C(6,3) C(6,2) C(5,2) C(5,1) C(6,1)...
      C(7,1) C(7,2) C(8,2) C(8,1)];

And it works and works fast. I made the same functions for 8- and 9-order curves, but it works very-very slow. 9-order, perhaps, will never end. At least, I have not had the patience to wait for the end - after 2 hours I just turned off the program. But the 7-order curve runs for 15 seconds. What's the matter? Can I do the same, but faster? Yes, the program needs to read 512 * 512 array elements, but it can not be impossible to make it faster.

So, what exactly I need - I have the coordinates of the array elements, and they are arranged in the order in which should be read. I need for acceptable time to read them and write in the new array. How to do it?

p.s. English is still hard for me, if something is unclear - ask me, please.

Ormsby answered 1/4, 2016 at 12:7 Comment(2)
I think you have a typo/bug, third-row fourth-value should be C(4,7) not C(8,7). The question is, how do you generate the fractal? where is your code?Anaesthesia
The thing is - I generated it maybe year before with c++ program. Its allright, (8,7) is a mistake of mine.Ormsby
A
7

Doing a quick search online, you can find a post about Hilbert curves on Steve Eddins blog. Here is his implementation to generate the curve:

function [x,y] = hilbert_curve(order)
    A = zeros(0,2);
    B = zeros(0,2);
    C = zeros(0,2);
    D = zeros(0,2);

    north = [ 0  1];
    east  = [ 1  0];
    south = [ 0 -1];
    west  = [-1  0];

    for i=1:order
        AA = [B ; north ; A ; east  ; A ; south ; C];
        BB = [A ; east  ; B ; north ; B ; west  ; D];
        CC = [D ; west  ; C ; south ; C ; east  ; A];
        DD = [C ; south ; D ; west  ; D ; north ; B];

        A = AA;
        B = BB;
        C = CC;
        D = DD;
    end

    subs = [0 0; cumsum(A)] + 1;
    x = subs(:,1);
    y = subs(:,2);
end

The returned xy-coordinates are integers in the range [1,2^order]. As you can see below, the function is sufficiently fast:

>> for order=1:10, tic, [x,y] = hilbert_curve(order); toc; end
Elapsed time is 0.001478 seconds.
Elapsed time is 0.000603 seconds.
Elapsed time is 0.000228 seconds.
Elapsed time is 0.000251 seconds.
Elapsed time is 0.000361 seconds.
Elapsed time is 0.000623 seconds.
Elapsed time is 0.001288 seconds.
Elapsed time is 0.007269 seconds.
Elapsed time is 0.029440 seconds.
Elapsed time is 0.117728 seconds.

Now let's test it with an image with the curve overlayed. We resize the image down to 128x128 so that we can see the pattern without getting overcrowded, but you can definitely do 512x512 for your case:

%// some grayscale square image
img = imread('cameraman.tif');

%// scale it down for better visualization
N = 128
assert(N > 0 && mod(N,2)==0);
img = imresize(img, [N N]);

%// space-filling Hilbert curve
order = log2(N)
[x,y] = hilbert_curve(order);

%// show image with curve overlayed
imshow(img, 'InitialMagnification',400)
h = line(x, y);

hilbert_curve

Let's zoom in a bit to better see how the curve covers all the pixels:

>> zoom(10)
>> set(h, 'Marker','.')

zoomed

Finally you can use the subscripts to index into the image matrix:

>> ind = sub2ind([N N], x, y);
>> pix = img(ind);    %// linear indexing

where:

>> whos ind
  Name          Size             Bytes  Class     Attributes

  ind       16384x1             131072  double  
Anaesthesia answered 1/4, 2016 at 18:10 Comment(3)
Thank you. Its really amazing.Ormsby
I know I’m a bit late, but is there a repository or somewhere where I can see this finished code? Ive also been working on this recently.Tendency
the code above is complete, that's the whole implementationAnaesthesia

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