I wrote C program that calculates the time step iterations of wavefunctions to solve the time depended Schrödinger equation. At some step I need to do forward and backward Fast Fourier Transformations (FFT) for which I used the library kissfft. (https://github.com/mborgerding/kissfft)

My programs structure is somewhat like this:

TDSE (working directory)
- modules
- include
- scripts
- test
  - inttest_analytical.c
- kissfft
  - libkissfft-double.dylib

Now when I compile my inttest_analytical.c it works. But when trying to run the executable afterwards I get the following error:

(base) user TDSE % ./inttest_analytical
dyld: Library not loaded: libkissfft-double.dylib
  Referenced from: /Users/user/Documents/Uni/HU Berlin/Computational Physics 2/Project 3 - Time-dependet Schroedinger Equation/TDSE/./inttest_analytical
  Reason: image not found
zsh: abort      ./inttest_analytical

After running otool -L ./inttest_analytical I get

/inttest_analytical:
        libkissfft-double.dylib (compatibility version 0.0.0, current version 0.0.0)
        /usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1281.100.1)

As far as I understand from reading about this in other questions on google searches, libkissfft-double.dylib is a static library but I don't manage to tell gcc where to find the library. And the path it was given (by the compiler or linker?) is the working directory TDSE instead of TDSE/kissfft For compilation I ran:

gcc -g -Wall -fPIC -I include -I kissff ./modules/wavefunction.c ./modules/integrator.c ./modules/geometry.c ./modules/linearalgebra.c ./modules/assert.c ./modules/hamiltonian.c ./modules/conjugategradient.c ./test/inttest_analytical.c -Lkissfft -lkissfft-double -o inttest_analytical

So I guess I am using the flags -L and -l wrong??

Thanks for any help.

I guess I'll use this question to write a canonical answer for all "image not found" issues.

1. The issue

Let's start with a minimal setup consisting of a main binary and a library, like so:

main.c:

#include <stdio.h>

extern int f(void);

int main(void)
{
    printf("%u\n", f());
    return 0;
}

xyz.c:

int f(void)
{
    return 42;
}

command line:

% cc -Wall -O3 -shared -o libxyz.dylib xyz.c
% cc -Wall -O3 -o main main.c -L. -lxyz

This works. You can run ./main and it will print 42.
However, if you now create a folder lib, move libxyz.dylib there and recompile main like so:

% cc -Wall -O3 -o main main.c -Llib -lxyz

Then the compilation will still succeed, however launching it will not:

% ./main
dyld: Library not loaded: libxyz.dylib
  Referenced from: /private/tmp/./main
  Reason: image not found

But if you go back and recompile libxyz.dylib to the lib folder directly and then rebuild main, like so:

% cc -Wall -O3 -shared -o lib/libxyz.dylib xyz.c
% cc -Wall -O3 -o main main.c -Llib -lxyz

Then it will once again work. But just to illustrate, this is the error you get if you move libxyz.dylib once more:

% ./main
dyld: Library not loaded: lib/libxyz.dylib
  Referenced from: /private/tmp/./main
  Reason: image not found

Just to make things worse though, you can also produce this error without even moving the library: simply cd lib and invoke ../main.

Also note the difference to before, libxyz.dylib vs lib/libxyz.dylib. This brings us to the core of the issue.

2. The reason

On macOS, each shared library has an "install name", i.e. the path at which it is expected to be found at runtime. This path can take three forms:

Absolute, e.g. /usr/lib/libxyz.dylib.
Relative, e.g. lib/libxyz.dylib.
Magic, e.g. @rpath/libxyz.dylib.

This path is embedded in the Mach-O header of the library, via the LC_ID_DYLIB load command. It can be viewed with otool like so:

% otool -l /tmp/lib/libxyz.dylib | fgrep -B1 -A5 LC_ID_DYLIB
Load command 2
          cmd LC_ID_DYLIB
      cmdsize 48
         name lib/libxyz.dylib (offset 24)
   time stamp 1 Thu Jan  1 01:00:01 1970
      current version 0.0.0
compatibility version 0.0.0

This load command is created by the linker, whose man page (man ld) tells us the following:

-install_name name
        Sets an internal "install path" (LC_ID_DYLIB) in a dynamic library.
        Any clients linked against the library will record that path as the
        way dyld should locate this library. If this option is not specified,
        then the -o path will be used. This option is also called
        -dylib_install_name for compatibility.

This tells us the three steps of how install names work:

The linker embeds the name when the library is built.
The linker copies the name into binaries linking against that library when those are built.
Dyld uses that name to try and load the library.

This will obviously cause issues if libraries are moved, or aren't even being compiled with the install name matching the path at which they will end up.

3. The solution

The solution is to change the install name path. Where and how depends on your setup. You can change it by two means:

Recompile the library with the correct install name (either -Wl,-install_name,... or outright -o ...), then recompile the main binary to link against that.
Use install_name_tool. This is a bit more involved.

In either case, you need to decide what form of install name you want to use:

Absolute.
This is recommended for libraries in global paths, shared by all users. You can also use this to point to your user directory, but it's a bit ugly since you can't move the binaries around or distribute them to someone else.
Relative.
Being relative to your working directory means this is entirely unreliable. Never use this. Just don't.
Magic.
There are three "special" tokens that go beyond absolute and relative paths:
- @executable_path is the runtime directory of the main binary of the process. This is the simplest form, but only works if your libraries are only used in a single main binary.
- @loader_path is the runtime directory of the binary depending on the library. I recommend not using this, as it breaks if you have two binaries in different folders that want to link to the same library.
- @rpath is a list of runtime directories assembled from LC_RPATH load commands. This is a bit more complex, but it's the most flexible solution, since it can itself contain @executable_path and @loader_path.
Use of those allows you to build binaries that can be moved around freely, so long as they all retain their relative position.
For a full description of them, see man dyld.

With that out of the way, let's look at implementing the possible solutions. We have:

cc -Wl,-install_name,... to specify an install name at compile time.
install_name_tool -id ... to change the path embedded in a library.
install_name_tool -change old new to change the path embedded in a binary linking against a library.

3.1 Absolute paths

If you can recompile both the library and the main binary:

% cc -Wall -O3 -shared -o /tmp/lib/libxyz.dylib xyz.c
% cc -Wall -O3 -o main main.c -L/tmp/lib -lxyz

If you can only recompile the main binary:

% install_name_tool -id '/tmp/lib/libxyz.dylib' /tmp/lib/libxyz.dylib
% cc -Wall -O3 -o main main.c -L/tmp/lib -lxyz

If you cannot recompile either:

% install_name_tool -id '/tmp/lib/libxyz.dylib' /tmp/lib/libxyz.dylib
% install_name_tool -change 'libxyz.dylib' '/tmp/lib/libxyz.dylib' main

3.2 `@executable_path`

If you can recompile both the library and the main binary:

% cc -Wall -O3 -shared -o lib/libxyz.dylib xyz.c -Wl,-install_name,'@executable_path/lib/libxyz.dylib'
% cc -Wall -O3 -o main main.c -Llib -lxyz

If you can only recompile the main binary:

% install_name_tool -id '@executable_path/lib/libxyz.dylib' lib/libxyz.dylib
% cc -Wall -O3 -o main main.c -Llib -lxyz

If you cannot recompile either:

% install_name_tool -id '@executable_path/lib/libxyz.dylib' lib/libxyz.dylib
% install_name_tool -change 'libxyz.dylib' '@executable_path/lib/libxyz.dylib' main

3.3 `@rpath`

Rpath requires manual addition of runtime paths, which requires some planning. Suppose you have the follwing file hierarchy:

a
bin/
- b
libx.dylib
lib/
- liby.dylib
- libz.dylib

a and b are binaries that both link against libx and liby, which in turn both link against libz. For the install name of libz, you can use neither @executable_path (because a and b are in different directories) nor @loader_path (because libx and liby are in different directories). But you can use either of them inside @rpath, and here is the decision you have to make:

You can either embed an rpath of @executable_path in a and @executable_path/.. in b. Then you can use @rpath to refer to the project root from all binaries. libz would have an install name of @rpath/lib/libz.dylib.
Or you can embed an rpath of @loader_path/lib in libx and @loader_path in liby. Then you can use @rpath to refer to the directory containing each binary. libz would have an install name of @rpath/libz.dylib.

I generally find the former to be easier to deal with, but the latter may be preferable if you have a large number of binaries scattered over many directories and only a few libraries.

To actually add an rpath to a binary, you can use:

cc -Wl,-rpath,... at compile time.
install_name_tool -add_rpath ... afterwards.

So if you can recompile both the library and the main binary:

% cc -Wall -O3 -shared -o lib/libxyz.dylib xyz.c -Wl,-install_name,'@rpath/lib/libxyz.dylib'
% cc -Wall -O3 -o main main.c -Llib -lxyz -Wl,-rpath,'@executable_path'

If you can only recompile the main binary:

% install_name_tool -id '@rpath/lib/libxyz.dylib' lib/libxyz.dylib
% cc -Wall -O3 -o main main.c -Llib -lxyz -Wl,-rpath,'@executable_path'

If you cannot recompile either:

% install_name_tool -id '@rpath/lib/libxyz.dylib' lib/libxyz.dylib
% install_name_tool -change 'libxyz.dylib' '@rpath/lib/libxyz.dylib' main
% install_name_tool -add_rpath '@executable_path' main

Note that if any of your binaries are signed, this will of course invalidate that signature. Use codesign -f ... to replace the existing signature(s).

1. The issue

2. The reason

3. The solution

3.1 Absolute paths

3.2 `@executable_path`

3.3 `@rpath`

Recommended topics

Hot tags

1. The issue

2. The reason

3. The solution

3.1 Absolute paths

3.2 @executable_path

3.3 @rpath

Recommended topics

Hot tags

3.2 `@executable_path`

3.3 `@rpath`