In the process of trying to find a solution to this SO question about saving a heatmap produced by d3heatmap, I encountered an unrelated problem using webshot within the development version of knitr (HT: hrbrmstr).
library(devtools)
devtools::install_github('yihui/knitr', build_vignettes = TRUE)
library(knitr)
After installing and loading the development version of knitr, I tried running the following .Rmd file:
---
title: "Untitled"
output: pdf_document
---
```{r}
library(d3heatmap)
d3heatmap(mtcars, scale = "column", colors = "Spectral")
```
I was prompted to install phantomjs:
webshot::install_phantomjs()
phantomjs.exe has been installed to /Users/USERNAME/Library/Application Support/PhantomJS
I tried running the .Rmd file again, but I got this error:
sh: ~/Library/Application Support/PhantomJS/phantomjs: No such file or directory
Quitting from lines 7-9 (test.Rmd)
Error in (function (url = NULL, file = "webshot.png", vwidth = 992, vheight = 744, :
webshot.js returned failure value: 127
Calls: <Anonymous> ... html_screenshot -> in_dir -> do.call -> <Anonymous>
Execution halted
I believe that the error is telling me that R can't find phantomjs.exe, but I see that it's located in the specified path. I know this screams stupid user error.
knitrdepending on the development version ofwebshot. – Zacheryzack