Although a bit late, I've come across this question while searching the solution for the same problem, so I hope it can be of any help...
Found myself in the same darkness than you. Just found this article, which explains some new hints introduced in NetBeans 7.4, including this one:
https://blogs.oracle.com/netbeansphp/entry/improve_your_code_with_new
The reason why it has been added is because superglobals usually are filled with user input, which shouldn't ever be blindly trusted. Instead, some kind of filtering should be done, and that's what the hint suggests. Filter the superglobal value in case it has some poisoned content.
For instance, where I had:
$_SERVER['SERVER_NAME']
I've put instead:
filter_input(INPUT_SERVER, 'SERVER_NAME', FILTER_SANITIZE_STRING)
You have the filter_input and filters doc here:
http://www.php.net/manual/en/function.filter-input.php
http://www.php.net/manual/en/filter.filters.php