Kryo crash EnvironmentFailureException
Asked Answered
T

1

10

I'm trying to serialize some objects of custom classes and I got the following exception:

    com.esotericsoftware.kryo.KryoException: com.sleepycat.je.EnvironmentFailureException: (JE 5.0.73) IdentityHashMap.entrySet() should not be used. See [#18167]. UNEXPECTED_STATE: Unexpected internal state, may have side effects.
Serialization trace:
highestFlushLevels (com.sleepycat.je.recovery.DirtyINMap)
checkpointDirtyMap (com.sleepycat.je.recovery.Checkpointer)
checkpointer (com.sleepycat.je.dbi.EnvironmentImpl)
envImpl (com.sleepycat.je.dbi.MemoryBudget)
budget (com.sleepycat.je.cleaner.DbFileSummaryMap)
dbFileSummaries (com.sleepycat.je.dbi.DatabaseImpl)
databaseImpl (com.sleepycat.je.Database)
db (com.thinkaurelius.titan.diskstorage.berkeleyje.BerkeleyJEKeyValueStore)
store (com.thinkaurelius.titan.diskstorage.keycolumnvalue.keyvalue.OrderedKeyValueStoreAdapter)
store (com.thinkaurelius.titan.diskstorage.keycolumnvalue.cache.NoKCVSCache)
edgeStore (com.thinkaurelius.titan.diskstorage.Backend)
backend (com.thinkaurelius.titan.graphdb.database.StandardTitanGraph)
graph (com.thinkaurelius.titan.graphdb.transaction.StandardTitanTx)
tx (com.thinkaurelius.titan.graphdb.types.vertices.PropertyKeyVertex)
key (com.thinkaurelius.titan.graphdb.relations.SimpleTitanProperty)
properties (main.java.com.bag.util.storage.RelationshipStorage)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:101)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeClassAndObject(Kryo.java:651)
    at com.esotericsoftware.kryo.serializers.MapSerializer.write(MapSerializer.java:113)
    at com.esotericsoftware.kryo.serializers.MapSerializer.write(MapSerializer.java:39)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    at com.esotericsoftware.kryo.serializers.FieldSerializer.write(FieldSerializer.java:505)
    at com.esotericsoftware.kryo.Kryo.writeClassAndObject(Kryo.java:651)
    at com.esotericsoftware.kryo.serializers.CollectionSerializer.write(CollectionSerializer.java:100)
    at com.esotericsoftware.kryo.serializers.CollectionSerializer.write(CollectionSerializer.java:40)
    at com.esotericsoftware.kryo.Kryo.writeClassAndObject(Kryo.java:651)
    at main.java.com.bag.server.TestServer.handleRelationshipRead(TestServer.java:299)
    at main.java.com.bag.server.TestServer.appExecuteUnordered(TestServer.java:219)
    at bftsmart.tom.server.defaultservices.DefaultRecoverable.executeUnordered(DefaultRecoverable.java:417)
    at bftsmart.tom.ServiceReplica.receiveReadonlyMessage(ServiceReplica.java:214)
    at bftsmart.tom.core.DeliveryThread.deliverUnordered(DeliveryThread.java:289)
    at bftsmart.tom.core.TOMLayer.requestReceived(TOMLayer.java:290)
    at bftsmart.communication.client.netty.NettyClientServerCommunicationSystemServerSide.channelRead0(NettyClientServerCommunicationSystemServerSide.java:184)
    at bftsmart.communication.client.netty.NettyClientServerCommunicationSystemServerSide.channelRead0(NettyClientServerCommunicationSystemServerSide.java:61)
    at io.netty.channel.SimpleChannelInboundHandler.channelRead(SimpleChannelInboundHandler.java:105)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:292)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:278)
    at io.netty.handler.codec.ByteToMessageDecoder.fireChannelRead(ByteToMessageDecoder.java:277)
    at io.netty.handler.codec.ByteToMessageDecoder.channelRead(ByteToMessageDecoder.java:264)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:292)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:278)
    at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:962)
    at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:131)
    at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:528)
    at io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:485)
    at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:399)
    at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:371)
    at io.netty.util.concurrent.SingleThreadEventExecutor$2.run(SingleThreadEventExecutor.java:112)
    at io.netty.util.concurrent.DefaultThreadFactory$DefaultRunnableDecorator.run(DefaultThreadFactory.java:137)
    at java.lang.Thread.run(Thread.java:745)
Caused by: com.sleepycat.je.EnvironmentFailureException: (JE 5.0.73) IdentityHashMap.entrySet() should not be used. See [#18167]. UNEXPECTED_STATE: Unexpected internal state, may have side effects.
    at com.sleepycat.je.EnvironmentFailureException.unexpectedState(EnvironmentFailureException.java:376)
    at com.sleepycat.je.utilint.IdentityHashMap.entrySet(IdentityHashMap.java:31)
    at com.esotericsoftware.kryo.serializers.MapSerializer.write(MapSerializer.java:98)
    at com.esotericsoftware.kryo.serializers.MapSerializer.write(MapSerializer.java:39)
    at com.esotericsoftware.kryo.Kryo.writeObject(Kryo.java:575)
    at com.esotericsoftware.kryo.serializers.ObjectField.write(ObjectField.java:80)
    ... 77 more

I have an ArrayList:

ArrayList<RelationshipStorage> relationshipStorage = new ArrayList<>();

The storage is serializable and all contents in it are as well.

But I still got this error and I don't know why. There is only one key and value in the property map. The key is a string and the value is a long string (a hash of the whole object).

Timecard answered 28/11, 2016 at 10:32 Comment(2)
Any chance you can provide the code where this is crashing in the form of a Minimal, Complete, Verifiable Example (stackoverflow.com/help/mcve)? That would really help.Neologize
I found out that one of the databases was filling up my objects with IdentityHashMap and not with the classic HashMap. That has been causing the problem.Timecard
T
2

Since my storage objects accept whatever kind of maps, I hadn't noticed that one of the databases returned the an IdentityHashMap instance. Removing that and enforcing the usage of a normal HashMap solved the problem.

Timecard answered 5/12, 2016 at 20:29 Comment(0)

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