mpi Questions
0
I'm a new linux user. I'm getting this error during compilation. When I use the 'make' command within a build directory.
Fatal Error: mpi.h No such file or directory
I've installed OpenMpi using t...
Aquarius asked 3/2, 2021 at 19:44
2
I am trying to understand what are the basic difference between Tensorflow Mirror Strategy and Horovod Distribution Strategy.
From the documentation and the source code investigation I found that ...
Lysozyme asked 5/3, 2019 at 17:15
0
Suppose I have 3 processes, and each wants to send 3 arrays a0,a1,a2 to processes 0,1, and 2.
Given the MPI_Alltoallv interface, that is,
int MPI_Alltoallv(const void *sendbuf, const int *sendcount...
4
Solved
I having some synchronization issues using the OpenMPI implementation of MPI_Barrier:
int rank;
int nprocs;
int rc = MPI_Init(&argc, &argv);
if(rc != MPI_SUCCESS) {
fprintf(stderr, "Una...
4
Solved
I want to create a generic MPI method, let's say a bcast for a specific object. but I need to convert primitive types to MPI_Data types ?
any idea how I can do it ?
template <typename T>
voi...
3
Solved
I'm working on a little application that multiples an array with a Matrix. It works without any problem. I'm loking for measure the execution time of the application. I can find the individual time...
1
I have just upgraded my Kubuntu from 18.04 to 20.04. Unfortunately there is an error that keeps showing up everytime I use apt upgrade or installing something with apt. The error is:
update-altern...
2
I have some code to print a 2D array to the standard output.
The problem is that when I run it, every process writes to the output and the data overlaps, rendering it unusable.
How can i build a c...
Preoccupied asked 12/1, 2012 at 19:26
5
I have been searching for a way to use mpi on my mac but everything is very advanced.
I have successfully installed open-mpi using
brew install open-mpi
I have .c files ready for compiling and ...
Shelburne asked 9/3, 2017 at 19:28
2
I have recently installed OpenMPI on my computer and when I try to run a simple Hello World program, it exits with the next error:
-------------------------------------------------------
Primary j...
2
The MPI-3 standard introduces shared-memory, that can be read and written by all processes sharing this memory without using calls to the MPI library.
While there are examples of one-sided communic...
Bullroarer asked 19/2, 2020 at 10:33
2
Horovod is combining NCCL and MPI into an wrapper for Distributed Deep Learning in for example TensorFlow.
I haven't heard of NCCL previously and was looking into its functionality. The following i...
Cordwood asked 27/11, 2018 at 11:45
2
-- I was able to solve this problem, see last edit below ---
I am trying to use R on the computing cluster of my institute. For parallel computing issues, I would like to install the snow and the ...
2
Solved
I often (but not always) get the following error when running MPI jobs after switching wifi hosts.
Fatal error in MPI_Init: Other MPI error, error stack:
MPIR_Init_thread(498)..............:
MPI...
Schatz asked 25/6, 2015 at 18:10
5
Solved
I am developing an MPI application which requires to be run with a specific implementation of MPI (let's call it MPIvA). On my workstation, another implementation of MPI (let's call it MPIvB) is in...
4
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I have defined a custom struct which I need to send over to another
MPI process using the MPI_Bsend (or MPI_Send).
Here is the struct:
struct car{
int shifts;
int topSpeed;
}myCar;
The issue...
1
I am writing a machine learning toolkit to run algorithm with different settings in parallel (each process run the algorithm for one setting). I am thinking about either to use mpi4py or python's b...
Discommodity asked 10/6, 2018 at 19:38
4
Solved
I had a quick look on the forums and I don't think this question has been asked already.
I am currently working with an MPI/CUDA hybrid code, made by somebody else during his PhD.
Each CPU has its...
1
Solved
I have a python script that depends on mpi4py implementation of MPI.
This needs to be run through mpiexec (or mpirun).
My Question is : How to run (and hopefully debug) a python script using mpiex...
Heath asked 16/8, 2019 at 5:8
1
Solved
I would like to run a job on the cluster. There are a different number of CPUs on different nodes and I have no idea which nodes will be assigned to me. What are the proper options so that the job ...
Sower asked 12/8, 2019 at 19:12
5
Solved
The problem I faced has been solved here:
Loading shared library in open-mpi/ mpi-run
I know not how, setting LD_LIBRARY_PATH or specifying -x LD_LIBRARY_PATH fixes the problem, when my installati...
Gerhardine asked 8/2, 2013 at 9:39
2
I have a problem with running a python Hello World mpi4py code on a virtual machine.
The hello.py code is:
#!/usr/bin/python
#hello.py
from mpi4py import MPI
comm = MPI.COMM_WORLD
size = comm.G...
5
this is how we use MPI_Init function
int main(int argc, char **argv)
{
MPI_Init(&argc, &argv);
…
}
why does MPI_Init use pointers to argc and argv instead of values of argv?
6
Does anyone know if it is possible to compile MPI with gcc?. I need to use gcc, no mpicc.
3
Background
I'm working on a C++ project in High Performance Computing using MPI. I have a function with a few different overloads, that I use to convert different types into strings:
void append(...
Delve asked 21/5, 2019 at 21:8
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