subgraph Questions

4

Solved

In the DOT language for GraphViz, I'm trying to represent a dependency diagram. I need to be able to have nodes inside a container and to be able to make nodes and/or containers dependent on other ...
Large asked 6/1, 2010 at 9:45

4

Solved

I am trying to have a node (or a subgraph, enclosing a node - whichever is possible/easier) rotated, like shown in this image: (Note that it doesn't matter to me if the "B" label is rotated - o...
Phia asked 23/12, 2010 at 0:22

5

Solved

I have an unweighted, connected graph. I want to find a connected subgraph that definitely includes a certain set of nodes, and as few extras as possible. How could this be accomplished? Just in c...
Darrickdarrill asked 20/10, 2010 at 7:52

8

Solved

I have a graph which contains an unknown number of disconnected subgraphs. What's a good algorithm (or Java library) to find them all?
Nauru asked 28/8, 2009 at 19:6

5

Solved

I'd like to have my graph looks like this: But I can only get this: The problem is, rankdir does not work in subgraph. So, how to emulate it? The code: digraph G { node [shape = circle] ...
Antinode asked 15/10, 2011 at 12:5

2

Solved

I was wondering if it's possible to do something like this in Graphviz: As you can see, node "two" is inside two clusters while the clusters aren't recursive. Note: Image made with Dia.
Stigmatize asked 12/3, 2018 at 18:11

1

INPUT Undirected graph G with n vertices and an integer k such that k divides n. The set of all vertices will be denoted by V. OUTPUT A set S of sets of vertices such that: S has k elements Eac...
Henkel asked 26/3, 2021 at 4:7

2

Solved

I have been dealing with Neo4j through python's Bulbflow and now need a way to save/export subgraphs. I have seen Java and even Ruby approaches for doing this, however a simple Python approach seem...
Epos asked 17/3, 2013 at 10:13

1

I am trying to create a graph using dot. The graph I have come up till now is given below and code is also given. Code digraph top { node [shape=record ,penwidth = 2,fontsize=25]; graph [labelju...
Jijib asked 22/4, 2015 at 7:58

1

I have a large Graphviz file where I have put different nodes and edges onto different layers. A number of nodes are grouped into a subgraph cluster. This makes it easy to focus on the particular p...
Ottillia asked 22/6, 2018 at 6:35

2

Solved

Is there a known algorithm or method to find all complete sub-graphs within a graph? I have an undirected, unweighted graph and I need to find all subgraphs within it where each node in the subgrap...
Spleenwort asked 10/5, 2010 at 7:59

2

Solved

I am wondering whether can I use networkx to extract all possible induced subgraphs (graphlets) with specific number of nodes in the subgraphs from an input large graph, or is there another package...
Menu asked 4/3, 2014 at 18:50

3

Solved

I would like to get a subgraph (red area) by node: The subgraph is composed of all the nodes reachable from the input node. like G.subgraph(3) returns a new DiGraph from the red area. For ex...
Saurischian asked 4/10, 2015 at 16:6

0

I have a dot file generated by a software called egypt. The dot file contains many nodes and edges. If I use this dot file to draw a picture, it is very hard see the picture clearly as there are to...
Photoreconnaissance asked 28/9, 2017 at 6:15

1

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I find graph-tool documentation extremely obscure and much more cryptic than other analogous libraries. I really can't figure out how to "extract" components (aka connected components) from a grap...
Brimful asked 23/1, 2017 at 16:37

2

Solved

I need to obtain a subgraph of the seed nodes (the input list of nodes; file.txt) and their first interactors (neighbours) from a graph (g) using igraph. Unfortunately, I am ending up with only a s...
Donndonna asked 15/5, 2014 at 15:6

1

Solved

How do I position the label for subgraph cluster to appear at it's left instead of being centered? digraph mygraph { test1; subgraph cluster_mysubgraph { label = "This text should be at the le...
Malita asked 7/3, 2016 at 8:2

4

Solved

In one of the projects I've worked on, the subject of isomorphism versus monomorphism came up. A little background: I'm no expert on graph theory and have no formal training in it. But this topic ...
Howund asked 20/1, 2009 at 0:53

5

Solved

I have an igraph object mygraph with ~10,000 nodes and ~145,000 edges, and I need to create a number of subgraphs from this graph but with different sizes. What I need is to create subgraphs from a...
Sheepdip asked 12/10, 2015 at 15:30

1

I have the following code: digraph G { bgcolor=antiquewhite; compound=true; { rankdir=LR ; rank=same g0 p1 p2 p3 h1; } subgraph cluster0 { style=filled; color=khaki; g0 [label="G",sh...
Kostival asked 11/5, 2015 at 14:19

2

Solved

Suppose I have 2 graphs A and B and I want to know if A is a subgraph of B. The nodes contain attributes, say, 'size' and 'material'. When I run: GM = networkx.algorithms.isomorphism.GraphMatcher...
Beating asked 27/3, 2013 at 23:31

1

Solved

I have the below graph and I need the clusters/subgraphs to be arranged left-to-right G-H-K-M-N-O-P. The contents of each subgraph is fine as-is. How do I accomplish this? I have tried adding invis...
Rosenwald asked 7/3, 2015 at 9:10

2

I've created a lightweight graph lib, which has 3 objects (Vertex, Edge, Graph) and 1 function (topo_sort), which looks like: class DAGError(Exception): pass def topo_sort(graph): sorted_list = ...
Lactoscope asked 18/8, 2013 at 15:17

1

Solved

I have collaboration data of inventors on patents. Each inventor is a node, each edge represents a patent on which two inventors have collaborated. Some patents have >2 inventors, so some patents a...
Corenecoreopsis asked 26/8, 2014 at 13:25

3

Solved

I've reduced my problem to the following simple example: digraph { subgraph {rank=same; 0 -> 1 -> 2;} 0 -> 2 [label="A"]; 2 -> 0 [label="B"]; } which produces While keeping 0, 1 ...
Harrietharriett asked 26/4, 2014 at 7:37

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